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Identification of SNP markers for population genetics studies of the Mediterranean gorgonian, Leptogorgia sarmentosa

M. Padrón 1 M. Milhes 2 A. Delcamp 3 E. Guichoux 3
2 GeT-PlaGe - Génome et Transcriptome - Plateforme Génomique
GET - Plateforme Génome & Transcriptome, INRAE - Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement : US 1426
Abstract : A set of single nucleotide polymorphisms (SNP) was developed from the transcriptome of the gorgonian Leptogorgia sarmentosa. 21,491 putative SNPs were identified, and a selected set of 320 SNPs was tested using a MassARRAY System on 95 samples from the NW Mediterranean. A total of 153 SNPs were successfully genotyped and found to be polymorphic. The newly developed loci will be a valuable tool for population genetics studies of one of the most ubiquitous gorgonian species in the Mediterranean Sea.
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https://hal.inrae.fr/hal-03283862
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Submitted on : Monday, July 12, 2021 - 11:33:35 AM
Last modification on : Tuesday, November 16, 2021 - 4:10:33 AM
Long-term archiving on: : Wednesday, October 13, 2021 - 6:28:47 PM

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M. Padrón, M. Milhes, A. Delcamp, E. Guichoux. Identification of SNP markers for population genetics studies of the Mediterranean gorgonian, Leptogorgia sarmentosa. Conservation Genetics Resources, Springer, 2021, pp.1-3. ⟨10.1007/s12686-021-01218-3⟩. ⟨hal-03283862⟩

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