Developments and opportunities with Workflow4Metabolomics

Lain Pavot (1) , Mélanie Pétéra (1) , Nils Paulhe (1) , Yann Guitton (2) , Gildas Le Corguillé (3, 4, 5, 6) , Julien Saint-Vanne (2) , Marie A Tremblay-Franco (7, 8) , Cécile Canlet (7, 8) , Jean-François Martin (7, 8) , Ralf Weber (9) , Cédric Delporte (10) , Florence Souard (10) , Céline Dalle (11) , Franck Giacomoni (1)

1 UNH - Unité de Nutrition Humaine
2 LABERCA - Laboratoire d'étude des Résidus et Contaminants dans les Aliments
3 ABIMS - ABiMS - Informatique et bioinformatique = Analysis and Bioinformatics for Marine Science
4 CNRS - Centre National de la Recherche Scientifique
5 FR2424 - Fédération de recherche de Roscoff
6 SBR - Station biologique de Roscoff
7 ToxAlim - ToxAlim
8 E20 - Metatoul AXIOM
9 University of Birmingham [Birmingham]
10 ULB - Faculté de Pharmacie [Bruxelles]
11 IRBA - Institut de Recherche Biomédicale des Armées [Brétigny-sur-Orge]

Metabolomics data analysis is a complex, multistep process, constantly evolving with the development of new analytical technologies, mathematical methods, bioinformatics tools and databases. Workflow4Metabolomics[1] is a collaborative portal dedicated to metabolomics data processing, analysis and annotation for the Metabolomics community. In the latest version of W4M, the core team proposes new upgrades for LC-MS, GC-MS and NMR pipelines, including new preprocessing steps, as well as enhancement of statistical analysis and annotation tools. W4M aims to promote open science in Metabolomics and facilitate knowledge dissemination by providing community resources.

Keywords: New W4M LC-MS; LC-MSMS; GC-MS; NMR pipelines

Domains: Life Sciences [q-bio]; Physics [physics]; Physics [physics]; Data Analysis, Statistics and Probability [physics.data-an]

Lain Pavot, Mélanie Pétéra, Nils Paulhe, Yann Guitton, Gildas Le Corguillé, et al.. Developments and opportunities with Workflow4Metabolomics. Analytics 2022, Sep 2022, Nantes, France. ⟨hal-03781084⟩