J. L. Barker-jr, A. S. Garden, and K. K. Ang, Quantification of volumetric and geometric changes occurring during fractionated radiotherapy for head-and-neck cancer using an integrated CT/linear accelerator system, International Journal of Radiation Oncology*Biology*Physics, vol.59, issue.4, pp.960-970, 2004.
DOI : 10.1016/j.ijrobp.2003.12.024

M. N. Duma, S. Kampfer, T. Schuster, C. Winkler, and H. Geinitz, Adaptive Strahlentherapie bei Weichteilgewebsver??nderungen w??hrend einer helikalen Tomotherapie bei Kopf-Hals-Patienten, Strahlentherapie und Onkologie, vol.75, issue.3, pp.243-247, 2012.
DOI : 10.1007/s00066-011-0041-8

T. Nishi, Y. Nishimura, T. Shibata, M. Tamura, N. Nishigaito et al., Volume and dosimetric changes and initial clinical experience of a two-step adaptive intensity modulated radiation therapy (IMRT) scheme for head and neck cancer, Radiotherapy and Oncology, vol.106, issue.1, pp.85-89, 2013.
DOI : 10.1016/j.radonc.2012.11.005

Y. Lai, S. Yang, and J. Liang, Impact of body-mass factors on setup displacement in patients with head and neck cancer treated with radiotherapy using daily on-line image guidance, Radiation Oncology, vol.9, issue.1, 2014.
DOI : 10.1016/j.radonc.2006.04.003

S. H. You, S. Y. Kim, and C. G. Lee, Is There a Clinical Benefit to Adaptive Planning During Tomotherapy in Patients with Head and Neck Cancer at Risk for Xerostomia?, American Journal of Clinical Oncology, vol.35, issue.3, pp.261-266, 2012.
DOI : 10.1097/COC.0b013e31820dc092

E. K. Hansen, M. K. Bucci, J. M. Quivey, V. Weinberg, and P. Xia, Repeat CT imaging and replanning during the course of IMRT for head-and-neck cancer, International Journal of Radiation Oncology*Biology*Physics, vol.64, issue.2, pp.355-362, 2006.
DOI : 10.1016/j.ijrobp.2005.07.957

C. Lee, K. M. Langen, and W. Lu, Assessment of Parotid Gland Dose Changes During Head and Neck Cancer Radiotherapy Using Daily Megavoltage Computed Tomography and Deformable Image Registration, International Journal of Radiation Oncology*Biology*Physics, vol.71, issue.5, pp.1563-1571, 2008.
DOI : 10.1016/j.ijrobp.2008.04.013

M. K. Kam, S. Leung, and B. Zee, Prospective Randomized Study of Intensity-Modulated Radiotherapy on Salivary Gland Function in Early-Stage Nasopharyngeal Carcinoma Patients, Journal of Clinical Oncology, vol.25, issue.31, pp.4873-4879, 2007.
DOI : 10.1200/JCO.2007.11.5501

C. M. Nutting, J. P. Morden, and K. J. Harrington, Parotid-sparing intensity modulated versus conventional radiotherapy in head and neck cancer (PARSPORT): a phase 3 multicentre randomised controlled trial, The Lancet Oncology, vol.12, issue.2, pp.127-136, 2011.
DOI : 10.1016/S1470-2045(10)70290-4

E. H. Pow, D. L. Kwong, and A. S. Mcmillan, Xerostomia and quality of life after intensity-modulated radiotherapy vs. conventional radiotherapy for early-stage nasopharyngeal carcinoma: Initial report on a randomized controlled clinical trial, International Journal of Radiation Oncology*Biology*Physics, vol.66, issue.4, pp.981-991, 2006.
DOI : 10.1016/j.ijrobp.2006.06.013

D. L. Schwartz, A. S. Garden, and S. J. Shah, Adaptive radiotherapy for head and neck cancer???Dosimetric results from a prospective clinical trial, Radiotherapy and Oncology, vol.106, issue.1, pp.80-84, 2013.
DOI : 10.1016/j.radonc.2012.10.010

Q. Wu, Y. Chi, P. Y. Chen, D. J. Krauss, D. Yan et al., Adaptive Replanning Strategies Accounting for Shrinkage in Head and Neck IMRT, International Journal of Radiation Oncology*Biology*Physics, vol.75, issue.3, pp.924-932, 2009.
DOI : 10.1016/j.ijrobp.2009.04.047

D. C. Van-rooijen, N. Van-wieringen, G. Stippel, J. Crezee, C. C. Koning et al., Dose-Guided Radiotherapy: Potential Benefit of Online Dose Recalculation for Stereotactic Lung Irradiation in Patients With Non-Small-Cell Lung Cancer, International Journal of Radiation Oncology*Biology*Physics, vol.83, issue.4, pp.557-562, 2012.
DOI : 10.1016/j.ijrobp.2011.12.055

J. Chen, O. Morin, M. Aubin, M. K. Bucci, C. F. Chuang et al., Dose-guided radiation therapy with megavoltage cone-beam CT, The British Journal of Radiology, vol.79, issue.special_issue_1, pp.87-98, 2006.
DOI : 10.1259/bjr/60612178
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.584.6350

P. Castadot, J. A. Lee, A. Parraga, X. Geets, B. Macq et al., Comparison of 12 deformable registration strategies in adaptive radiation therapy for the treatment of head and neck tumors, Radiotherapy and Oncology, vol.89, issue.1, pp.1-12, 2008.
DOI : 10.1016/j.radonc.2008.04.010

A. Mencarelli, S. R. Van-kranen, and O. Hamming-vrieze, Deformable Image Registration for Adaptive Radiation Therapy of Head and Neck Cancer: Accuracy and Precision in the Presence of Tumor Changes, International Journal of Radiation Oncology*Biology*Physics, vol.90, issue.3, pp.680-687, 2014.
DOI : 10.1016/j.ijrobp.2014.06.045

J. Thirion, Image matching as a diffusion process: an analogy with Maxwell's demons, Medical Image Analysis, vol.2, issue.3, pp.243-260, 1998.
DOI : 10.1016/S1361-8415(98)80022-4

D. Rueckert, L. I. Sonoda, C. Hayes, D. L. Hill, M. O. Leach et al., Nonrigid registration using free-form deformations: application to breast MR images, IEEE Transactions on Medical Imaging, vol.18, issue.8, pp.712-721, 1999.
DOI : 10.1109/42.796284

D. Berwouts, L. A. Olteanu, and F. Duprez, Three-phase adaptive dose-painting-by-numbers for head-and-neck cancer: initial results of the phase I clinical trial, Radiotherapy and Oncology, vol.107, issue.3, pp.310-316, 2013.
DOI : 10.1016/j.radonc.2013.04.002

J. Daisne and A. Blumhofer, Atlas-based automatic segmentation of head and neck organs at risk and nodal target volumes: a clinical validation, Radiation Oncology, vol.8, issue.1, 2013.
DOI : 10.1016/j.ijrobp.2008.11.041

T. E. Schultheiss and W. A. Tome, It is not appropriate to ???deform??? dose along with deformable image registration in adaptive radiotherapy, Medical Physics, vol.39, issue.11, pp.6531-6533, 2012.
DOI : 10.1118/1.3666948

T. E. Schultheiss, W. A. Tome, and C. G. Orton, It is not appropriate to ???deform??? dose along with deformable image registration in adaptive radiotherapy, Medical Physics, vol.39, issue.11, pp.6531-6533, 2012.
DOI : 10.1118/1.3666948

T. E. Schultheiss and W. A. Tome, Comment on 'it is not appropriate to 'deform' dose along with deformable image registration in adaptive radiotherapy, Medical Physics, vol.40, issue.1, 2012.

U. J. Yeo, M. L. Taylor, and J. R. Supple, Is it sensible to ???deform??? dose? 3D experimental validation of dose-warping, Medical Physics, vol.61, issue.8, pp.5065-5072, 2012.
DOI : 10.1016/j.ijrobp.2004.05.063

A. Mencarelli, S. Van-beek, L. J. Zijp, C. Rasch, M. Van-herk et al., Automatic detection system for multiple region of interest registration to account for posture changes in head and neck radiotherapy, Physics in Medicine and Biology, vol.59, issue.8, 2005.
DOI : 10.1088/0031-9155/59/8/2005

R. Mohan, Q. Wu, M. Manning, and R. Schmidt-ullrich, Radiobiological considerations in the design of fractionation strategies for intensity-modulated radiation therapy of head 16

N. Lee, C. Chuang, and J. M. Quivey, Skin toxicity due to intensity-modulated radiotherapy for head-and-neck carcinoma, International Journal of Radiation Oncology*Biology*Physics, vol.53, issue.3, pp.630-637, 2002.
DOI : 10.1016/S0360-3016(02)02756-6

J. P. Gérard, C. Ortholan, and Y. Pointreau, ??ditorial, Cancer/Radioth??rapie, vol.14, issue.4-5, pp.227-410, 2010.
DOI : 10.1016/j.canrad.2010.05.003

S. Klein, M. Staring, P. Andersson, and J. P. Pluim, Preconditioned Stochastic Gradient Descent Optimisation for Monomodal Image Registration, International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '11), pp.549-556, 2011.
DOI : 10.1109/42.796284

H. J. Johnson, M. Mccormick, and L. Ibanez, The ITK Software Guide, 2013.

G. Cazoulat, A. Simon, and A. , Surface-Constrained Nonrigid Registration for Dose Monitoring in Prostate Cancer Radiotherapy, IEEE Transactions on Medical Imaging, vol.33, issue.7, pp.1464-1474, 2014.
DOI : 10.1109/TMI.2014.2314574
URL : https://hal.archives-ouvertes.fr/inserm-00978107

S. Klein, M. Staring, K. Murphy, M. A. Viergever, and J. P. Pluim, <emphasis emphasistype="mono">elastix</emphasis>: A Toolbox for Intensity-Based Medical Image Registration, IEEE Transactions on Medical Imaging, vol.29, issue.1, pp.196-205, 2010.
DOI : 10.1109/TMI.2009.2035616

L. R. Dice, Measures of the Amount of Ecologic Association Between Species, Ecology, vol.26, issue.3, pp.297-302, 1945.
DOI : 10.2307/1932409

T. Dijkema, C. P. Raaijmakers, and R. K. Haken, Parotid Gland Function After Radiotherapy: The Combined Michigan and Utrecht Experience, International Journal of Radiation Oncology*Biology*Physics, vol.78, issue.2, pp.449-453, 2010.
DOI : 10.1016/j.ijrobp.2009.07.1708

Y. Nishimura, K. Nakamatsu, and T. Shibata, Importance of the Initial Volume of Parotid Glands in Xerostomia for Patients with Head and Neck Cancers Treated with IMRT, Japanese Journal of Clinical Oncology, vol.35, issue.7, pp.375-379, 2005.
DOI : 10.1093/jjco/hyi108

J. Pukala, S. L. Meeks, R. J. Staton, F. J. Bova, R. R. Mañon et al., A virtual phantom library for the quantification of deformable image registration uncertainties in patients with cancers of the head and neck, Medical Physics, vol.21, issue.11, 2013.
DOI : 10.1097/00004728-199707000-00007

C. Paganelli, M. Peroni, and M. Riboldi, Scale invariant feature transform in adaptive radiation therapy: a tool for deformable image registration assessment and re-planning indication, Physics in Medicine and Biology, vol.58, issue.2, pp.287-299, 2013.
DOI : 10.1088/0031-9155/58/2/287

N. Hardcastle, W. A. Tomé, and D. M. Cannon, A multi-institution evaluation of deformable image registration algorithms for automatic organ delineation in adaptive head and neck radiotherapy, Radiation Oncology, vol.7, issue.1, p.90, 2012.
DOI : 10.1016/j.ijrobp.2006.01.014

J. V. Siebers and H. Zhong, An energy transfer method for 4D Monte Carlo dose calculation, Medical Physics, vol.18, issue.9, pp.4096-4105, 2008.
DOI : 10.1109/42.816070

S. Nithiananthan, S. Schafer, and D. J. Mirota, Extra-dimensional Demons: A method for incorporating missing tissue in deformable image registration, Medical Physics, vol.38, issue.4, pp.5718-5731, 2012.
DOI : 10.1118/1.3554647