A year (2014-2015) of plants in Proteomics journal. Progress in wet and dry methodologies, moving from protein catalogs, and the view of classic plant biochemists

Rosa Sanchez-Lucas (1) , Angela Mehta (2) , Luis Valledor (3) , Francisco Cabello Hurtado (4) , M. Cristina Romero-Rodriguez (5, 4) , Lyudmila Simova Stoilova (6) , Sekvan Demir (1) , Luis E. Rodriguez De Francisco (1) , Ana M. Maldonado Alconada (1) , Ana L. Jorrin-Prieto (1) , Jesus V Jorrín-Novo (1)

1 Universidad de Córdoba = University of Córdoba [Córdoba]
2 CENARGEN - Embrapa Recursos Genéticos e Biotecnologia
3 University of Oviedo
4 ECOBIO - Ecosystèmes, biodiversité, évolution [Rennes]
5 UNA - Universidad Nacional de Asunción [Paraguay] = National University of Asunción = Université nationale d'Asunción
6 BAS - Bulgarian Academy of Sciences

The present review is an update of the previous one published in Proteomics 2015 Reviews special issue [Jorrin-Novo, J. V. et al., Proteomics 2015, 15, 1089-1112] covering the July 2014-2015 period. It has been written on the bases of the publications that appeared in Proteomics journal during that period and the most relevant ones that have been published in other high-impact journals. Methodological advances and the contribution of the field to the knowledge of plant biology processes and its translation to agroforestry and environmental sectors will be discussed. This review has been organized in four blocks, with a starting general introduction (literature survey) followed by sections focusing on the methodology (in vitro, in vivo, wet, and dry), proteomics integration with other approaches (systems biology and proteogenomics), biological information, and knowledge (cell communication, receptors, and signaling), ending with a brief mention of some other biological and translational topics to which proteomics has made some contribution.

Mots clés: Plant proteomics; Proteogenomics; Signaling; Signal Transduction; Systems Biology

Domaines: Sciences du Vivant [q-bio]

Rosa Sanchez-Lucas, Angela Mehta, Luis Valledor, Francisco Cabello Hurtado, M. Cristina Romero-Rodriguez, et al.. A year (2014-2015) of plants in Proteomics journal. Progress in wet and dry methodologies, moving from protein catalogs, and the view of classic plant biochemists. Proteomics, 2016, 16 (5), pp.866-876. ⟨10.1002/pmic.201500351⟩. ⟨hal-01239816⟩