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Genetic and phenotypic dissection of 1q43q44 microdeletion syndrome and neurodevelopmental phenotypes associated with mutations in ZBTB18 and HNRNPU

Christel Depienne 1, 2, 3, * Caroline Nava 4, 2 Boris Keren 4, 2 Solveig Heide 5 Agnès Rastetter 2 Sandrine Passemard 6, 7 Sandra Chantot-Bastaraud 8 Marie-Laure Moutard 8 Pankaj B. Agrawal Grace Vannoy Joan M. Stoler David J. Amor Thierry Villemeur 6 Diane Doummar 8 Caroline Alby 9 Valérie Cormier-Daire 9 Catherine Garel 8 Pauline Marzin Sophie Scheidecker Anne de Saint-Martin 3 Edouard Hirsch 10, 3 Christian Korff 11 Armand Bottani 12 Laurence Faivre 13 Alain Verloes 14, 15 Christine Orzechowski Lydie Burglen 8, 6 Bruno Leheup 16 Joëlle Roume 17 Joris Andrieux 18 Frenny Sheth Chaitanya Datar Michael J. Parker Laurent Pasquier 19 Sylvie Odent 20, 19 Sophie Naudion Marie-Ange Delrue 21 Cédric Le Caignec 22 Marie Vincent 23 Bertrand Isidor 23, 24 Florence Renaldo 25, 6 Fiona Stewart Annick Toutain 26, 27 Udo Koehler Birgit Häckl Celina Stülpnagel Gerhard Kluger 28, 29 Rikke S. Møller Deb Pal Tord Jonson Maria Soller 30 Nienke E. Verbeek Mieke M. Haelst Carolien Kovel Bobby Koeleman Glen Monroe Gijs Haaften Ddd Study Tania Attie-Bitach 31, 9 Lucile Boutaud 31, 9 Delphine Héron 32, 5 Cyril Mignot 32, 5, *
* Corresponding author
1 Service de génétique, cytogénétique, embryologie [CHU Pitié-Salpétrière]
2 ICM - Institut du Cerveau et de la Moëlle Epinière = Brain and Spine Institute
3 IGBMC - Institut de Génétique et de Biologie Moléculaire et Cellulaire
4 Service de Génétique Cytogénétique et Embryologie [CHU Pitié-Salpêtrière]
5 GRC - Groupe de Recherche Clinique : Déficience Intellectuelle et Autisme
6 PROTECT - Neuroprotection du Cerveau en Développement / Promoting Research Oriented Towards Early Cns Therapies
7 Unité de Neurologie, Hôpital Robert Debré
8 CHU Trousseau [APHP]
9 IMAGINE - U1163 - Imagine - Institut des maladies génétiques
10 Service de Neurologie [Strasbourg]
11 Dpt de l'Enfant et de l'Adolescent, Neuropédiatrie [Genève]
12 Génétique médicale
13 GAD - Génétique des Anomalies du Développement
14 Physiopathologie et neuroprotection des atteintes du cerveau en développement
15 Département de génétique
16 Service de Génétique Médicale [CHRU Nancy]
17 Service de Génétique
18 Laboratoire de Génétique Clinique
19 Service de génétique clinique [Rennes]
20 IGDR - Institut de Génétique et Développement de Rennes
21 MRGM - Maladies Rares - Génétique et Métabolisme
22 CHU Nantes - Centre hospitalier universitaire de Nantes
23 Service de génétique médicale - Unité de génétique clinique [Nantes]
24 PhAN - Physiopathologie des Adaptations Nutritionnelles
25 Service de neurologie pédiatrique et maladies métaboliques
26 Service de génétique [Tours]
27 iBrain - Inserm U1253 - UNIV Tours - Imagerie et cerveau
28 Hospital for Neuropediatrics and Neurological Rehabilitation
29 PMU - Paracelsus Medizinische Privatuniversität = Paracelsus Medical University
30 Department of Clinical Genetics
31 CHU Necker - Enfants Malades [AP-HP]
32 CHU Pitié-Salpêtrière [AP-HP]
Abstract : Subtelomeric 1q43q44 microdeletions cause a syndrome associating intellectual disability, microcephaly, seizures and anomalies of the corpus callosum. Despite several previous studies assessing genotype-phenotype correlations, the contribution of genes located in this region to the specific features of this syndrome remains uncertain. Among those, three genes, AKT3, HNRNPU and ZBTB18 are highly expressed in the brain and point mutations in these genes have been recently identified in children with neurodevelopmental phenotypes. In this study, we report the clinical and molecular data from 17 patients with 1q43q44 microdeletions, four with ZBTB18 mutations and seven with HNRNPU mutations, and review additional data from 37 previously published patients with 1q43q44 microdeletions. We compare clinical data of patients with 1q43q44 microdeletions with those of patients with point mutations in HNRNPU and ZBTB18 to assess the contribution of each gene as well as the possibility of epistasis between genes. Our study demonstrates that AKT3 haploinsufficiency is the main driver for microcephaly, whereas HNRNPU alteration mostly drives epilepsy and determines the degree of intellectual disability. ZBTB18 deletions or mutations are associated with variable corpus callosum anomalies with an incomplete penetrance. ZBTB18 may also contribute to microcephaly and HNRNPU to thin corpus callosum, but with a lower penetrance. Co-deletion of contiguous genes has additive effects. Our results confirm and refine the complex genotype-phenotype correlations existing in the 1qter microdeletion syndrome and define more precisely the neurodevelopmental phenotypes associated with genetic alterations of AKT3, ZBTB18 and HNRNPU in humans.
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Journal articles
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https://hal-univ-rennes1.archives-ouvertes.fr/hal-01502135
Contributor : Laurent Jonchère Connect in order to contact the contributor
Submitted on : Wednesday, April 5, 2017 - 10:09:00 AM
Last modification on : Wednesday, January 26, 2022 - 12:58:02 PM

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UNIV-RENNES1 | IGDR | UNIV-PARIS5 | CNRS | UNIV-PARIS7 | IGBMC | UPMC | ICM | UNIV-NANTES | UNIV-BOURGOGNE | BIOSIT | UR1-UFR-SVE | USPC | UNIV-TOURS | SITE-ALSACE | UNIV-RENNES | SORBONNE-UNIVERSITE | SU-MEDECINE | IBPS | SU-SCIENCES | UNIV-PARIS | UP-SANTE | SU-TI | UR1-BIO-SA | ANR | INRAE

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Christel Depienne, Caroline Nava, Boris Keren, Solveig Heide, Agnès Rastetter, et al.. Genetic and phenotypic dissection of 1q43q44 microdeletion syndrome and neurodevelopmental phenotypes associated with mutations in ZBTB18 and HNRNPU. Human Genetics, Springer Verlag, 2017, 136 (4), pp.463-479. ⟨10.1007/s00439-017-1772-0⟩. ⟨hal-01502135⟩

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