Linguistic pitch analysis using functional principal component mixed effect models, Journal of the Royal Statistical Society: Series C (Applied Statistics), vol.33, issue.2, pp.297-317, 2010. ,
DOI : 10.1002/0470013192.bsa239
Optimizing principal component models for representing interfraction variation in lung cancer radiotherapy, Medical Physics, vol.68, issue.2, pp.5080-5091, 2010. ,
DOI : 10.1016/j.ijrobp.2007.01.056
Computer Vision, first edition Edition, 1982. ,
Measurement of prostate movement over the course of routine radiotherapy using implanted markers, International Journal of Radiation Oncology*Biology*Physics, vol.31, issue.1, pp.113-118, 1995. ,
DOI : 10.1016/0360-3016(94)00382-U
Phenomenological modeling of tumor diameter growth based on a mixed effects model, Journal of Theoretical Biology, vol.262, issue.3, pp.544-552, 2010. ,
DOI : 10.1016/j.jtbi.2009.10.008
URL : https://hal.archives-ouvertes.fr/hal-00390380
Spatiotemporal linear mixed effects modeling for the mass-univariate analysis of longitudinal neuroimage data, NeuroImage, vol.81, pp.358-370, 2013. ,
DOI : 10.1016/j.neuroimage.2013.05.049
A hierarchical latent variable model for data visualization, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.20, issue.3, pp.281-293, 1998. ,
DOI : 10.1109/34.667885
Statistical Modeling of CTV Motion and??Deformation for IMRT of Early-Stage Rectal??Cancer, International Journal of Radiation Oncology*Biology*Physics, vol.90, issue.3, pp.664-672, 2014. ,
DOI : 10.1016/j.ijrobp.2014.06.040
Parametrization of Closed Surfaces for 3-D Shape Description, Computer Vision and Image Understanding, vol.61, issue.2, pp.154-170, 1995. ,
DOI : 10.1006/cviu.1995.1013
Applied Longitudinal Analysis Wiley Series in Probability and Statistics, 2011. ,
Numerical analysis of a model of organ motion using serial imaging measurements from prostate radiotherapy, Physics in Medicine and Biology, vol.46, issue.9, p.2337, 2001. ,
DOI : 10.1088/0031-9155/46/9/305
Using serial imaging data to model variabilities in organ position and shape during radiotherapy, Physics in Medicine and Biology, vol.46, issue.9, pp.2317-2353, 2001. ,
DOI : 10.1088/0031-9155/46/9/304
Intensity-Modulated Radiotherapy as Primary Therapy for Prostate Cancer: Report on Acute Toxicity After Dose Escalation With Simultaneous Integrated Boost to Intraprostatic Lesion, International Journal of Radiation Oncology*Biology*Physics, vol.72, issue.3, pp.799-807, 2008. ,
DOI : 10.1016/j.ijrobp.2008.01.040
Longitudinal and Panel Data: Analysis and Applications in the Social Sciences, 2004. ,
DOI : 10.1017/CBO9780511790928
Shape analysis of brain ventricles using SPHARM, Proceedings IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA 2001), pp.171-178, 2001. ,
DOI : 10.1109/MMBIA.2001.991731
Longitudinal functional principal component analysis, Electronic Journal of Statistics, vol.4, issue.0, pp.1022-1054, 2010. ,
DOI : 10.1214/10-EJS575SUPP
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3131008
Functional Mixed Effects Models, Biometrics, vol.50, issue.1, pp.121-128, 2002. ,
DOI : 10.2307/2532783
Modeling postradiation prostate specific antigen level kinetics, Cancer, vol.6, issue.1, pp.130-134, 1998. ,
DOI : 10.1002/(SICI)1097-0142(19980701)83:1<130::AID-CNCR17>3.0.CO;2-Y
Online 4-D CT Estimation for Patient-Specific Respiratory Motion Based on Real-Time Breathing Signals, Med Image Comput Comput Assist Interv, vol.13, pp.392-399, 2010. ,
DOI : 10.1007/978-3-642-15711-0_49
Statistical shape models for 3D medical image segmentation: A review, Medical Image Analysis, vol.13, issue.4, pp.543-563, 2009. ,
DOI : 10.1016/j.media.2009.05.004
A model to simulate day-to-day variations in rectum shape, International Journal of Radiation Oncology*Biology*Physics, vol.54, issue.2, pp.615-625, 2002. ,
DOI : 10.1016/S0360-3016(02)02946-2
Analysis of a complex of statistical variables into principal components., Journal of Educational Psychology, vol.24, issue.6, pp.417-441, 1933. ,
DOI : 10.1037/h0071325
Population-based prediction of subject-specific prostate deformation for MR-to-ultrasound image registration, Medical Image Analysis, vol.26, issue.1, pp.332-344, 2015. ,
DOI : 10.1016/j.media.2015.10.006
Principal Component Analysis, 2002. ,
Elastic model-based segmentation of 3-D neuroradiological data sets, IEEE Transactions on Medical Imaging, vol.18, issue.10, pp.828-839, 1999. ,
DOI : 10.1109/42.811260
A numerical simulation of organ motion and daily setup uncertainties: Implications for radiation therapy, International Journal of Radiation Oncology*Biology*Physics, vol.37, issue.1, pp.213-221, 1997. ,
DOI : 10.1016/S0360-3016(96)00477-4
MIC: Mutual information based hierarchical clustering Information Theory and Statistical Learning, pp.101-123, 2009. ,
DOI : 10.1007/978-0-387-84816-7_5
URL : http://arxiv.org/abs/0809.1605
Random-Effects Models for Longitudinal Data, Biometrics, vol.38, issue.4, pp.963-974, 1982. ,
DOI : 10.2307/2529876
Predicting toxicity in radiotherapy for prostate cancer, Physica Medica, vol.32, issue.3, pp.521-532, 2016. ,
DOI : 10.1016/j.ejmp.2016.03.003
Longitudinal data analysis using generalized linear models, Biometrika, vol.73, issue.1, pp.13-22, 1986. ,
DOI : 10.1093/biomet/73.1.13
Chapter 3 -linear mixed-effects models Methods and Applications of Longitudinal Data Analysis, pp.61-94, 2016. ,
Generation of Point-Based 3D Statistical Shape Models for Anatomical Objects, Computer Vision and Image Understanding, vol.77, issue.2, pp.175-191, 2000. ,
DOI : 10.1006/cviu.1999.0814
Multimodality image registration by maximization of mutual information, IEEE Transactions on Medical Imaging, vol.16, issue.2, pp.187-198, 1997. ,
DOI : 10.1109/42.563664
Computerized design of target margins for treatment uncertainties in conformal radiotherapy, International Journal of Radiation Oncology*Biology*Physics, vol.43, issue.2, pp.437-445, 1999. ,
DOI : 10.1016/S0360-3016(98)00386-1
A method of incorporating organ motion uncertainties into three-dimensional conformal treatment plans, International Journal of Radiation Oncology*Biology*Physics, vol.35, issue.2, pp.333-342, 1996. ,
DOI : 10.1016/0360-3016(96)00008-9
Respiratory motion models: A review, Medical Image Analysis, vol.17, issue.1, pp.19-42, 2013. ,
DOI : 10.1016/j.media.2012.09.005
Variation in prostate position quantitation and implications for three-dimensional conformal treatment planning, International Journal of Radiation Oncology*Biology*Physics, vol.38, issue.1, 1997. ,
DOI : 10.1016/S0360-3016(97)00221-6
Wavelet-based functional mixed models, Journal of the Royal Statistical Society: Series B (Statistical Methodology), vol.93, issue.2, pp.179-199, 2006. ,
DOI : 10.1198/016214502388618672
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2744105
Quantification of dose uncertainties in cumulated dose estimation compared to planned dose in prostate IMRT, Radiotherapy and Oncology, vol.119, issue.1, pp.129-136, 2016. ,
DOI : 10.1016/j.radonc.2016.03.007
URL : https://hal.archives-ouvertes.fr/hal-01301536
Isogeometric analysis: An overview and computer implementation aspects, Mathematics and Computers in Simulation, vol.117, pp.89-116, 2015. ,
DOI : 10.1016/j.matcom.2015.05.008
URL : http://arxiv.org/pdf/1205.2129
Bladder dose???surface maps and urinary toxicity: Robustness with respect to motion in assessing local dose effects, Physica Medica, vol.32, issue.3, pp.506-511, 2016. ,
DOI : 10.1016/j.ejmp.2016.03.006
First application of a pixel-wise analysis on bladder dose???surface maps in prostate cancer radiotherapy, Radiotherapy and Oncology, vol.119, issue.1, pp.123-128, 2016. ,
DOI : 10.1016/j.radonc.2016.02.025
A geometric model for evaluating the effects of inter-fraction rectal motion during prostate radiotherapy, Physics in Medicine and Biology, vol.49, issue.12, pp.49-2613, 2004. ,
DOI : 10.1088/0031-9155/49/12/010
Automated model-based organ delineation for radiotherapy planning in prostatic region, International Journal of Radiation Oncology*Biology*Physics, vol.60, issue.3, pp.973-980, 2004. ,
DOI : 10.1016/j.ijrobp.2004.06.004
Mixed-Effects Models in S and S-PLUS, 2000. ,
DOI : 10.1007/978-1-4419-0318-1
Unconstrained parametrizations for variance-covariance matrices, Statistics and Computing, vol.46, issue.2, pp.289-296, 1996. ,
DOI : 10.1007/BF00140873
Effect of the Addition of Chemotherapy to Radiotherapy on Cognitive Function in Patients With Low-Grade Glioma: Secondary Analysis of RTOG 98-02, Journal of Clinical Oncology, vol.32, issue.6, pp.535-541, 2014. ,
DOI : 10.1200/JCO.2013.53.1830
Model-guided respiratory organ motion prediction of the liver from 2D ultrasound, Medical Image Analysis, vol.18, issue.5, pp.740-751, 2014. ,
DOI : 10.1016/j.media.2014.03.006
A method to calculate coverage probability from uncertainties in radiotherapy via a statistical shape model, Physics in Medicine and Biology, vol.52, issue.7, pp.1947-1965, 2007. ,
DOI : 10.1088/0031-9155/52/7/012
Characterization of Bladder Motion and Deformation in Prostate Cancer Radiotherapy, IRBM, vol.37, issue.5-6, 2016. ,
DOI : 10.1016/j.irbm.2016.09.001
URL : https://hal.archives-ouvertes.fr/hal-01484707
Evaluation of changes in the size and location of the prostate, seminal vesicles, bladder, and rectum during a course of external beam radiation therapy, International Journal of Radiation Oncology*Biology*Physics, vol.33, issue.5, pp.1321-1329, 1995. ,
DOI : 10.1016/0360-3016(95)00225-1
The relationship between external beam radiotherapy dose and chronic urinary dysfunction ??? A methodological critique, Radiotherapy and Oncology, vol.97, issue.1, pp.40-47, 2010. ,
DOI : 10.1016/j.radonc.2010.08.002
Image Similarity Using Mutual Information of Regions, Computer Vision -ECCV 2004, pp.596-607, 2004. ,
DOI : 10.1007/978-3-540-24672-5_47
MODELING THREE-DIMENSIONAL MORPHOLOGICAL STRUCTURES USING SPHERICAL HARMONICS, Evolution, vol.36, issue.4, pp.1003-1016, 2009. ,
DOI : 10.1093/sysbio/44.2.179
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2936781
A surface-based approach for classification of 3d neuroanatomical structures, Intelligent Data Analysis, vol.8, issue.6, pp.519-542, 2004. ,
Fourier method for large-scale surface modeling and registration, Computers & Graphics, vol.33, issue.3, pp.299-311, 2009. ,
DOI : 10.1016/j.cag.2009.03.002
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2802331
Modelling individual geometric variation based on dominant eigenmodes of organ deformation: implementation and evaluation, Physics in Medicine and Biology, vol.50, issue.24, pp.50-5893, 2005. ,
DOI : 10.1088/0031-9155/50/24/009
Dosimetric treatment course simulation based on a statistical model of deformable organ motion, Physics in Medicine and Biology, vol.57, issue.12, pp.3693-3709, 2012. ,
DOI : 10.1088/0031-9155/57/12/3693
Inclusion of geometrical uncertainties in radiotherapy treatment planning by means of coverage probability, International Journal of Radiation Oncology*Biology*Physics, vol.43, issue.4, pp.905-919, 1999. ,
DOI : 10.1016/S0360-3016(98)00468-4
Boundary and medial shape analysis of the hippocampus in schizophrenia, Medical Image Analysis, vol.8, issue.3, pp.197-203, 2004. ,
DOI : 10.1016/j.media.2004.06.004
Framework for the Statistical Shape Analysis of Brain Structures using SPHARM-PDM, Insight J, pp.242-250, 1071. ,
Segmentation of 2-D and 3-D objects from MRI volume data using constrained elastic deformations of flexible Fourier contour and surface models, Medical Image Analysis, vol.1, issue.1, pp.19-34, 1996. ,
DOI : 10.1016/S1361-8415(01)80003-7
Efficient shape representation and statistical shape modeling of the liver using spherical harmonic functions (SPHARM), 2012 Joint 6th International Conference on Soft Computing and Intelligent Systems (SCIS) and 13th International Symposium on Advanced Intelligent Systems (ISIS). pp, pp.428-431, 2012. ,
Treatment planning issues related to prostate movement in response to differential filling of the rectum and bladder, International Journal of Radiation Oncology*Biology*Physics, vol.20, issue.6, pp.1317-1324, 1991. ,
DOI : 10.1016/0360-3016(91)90244-X
Statistical simulations to estimate motion-inclusive dose-volume histograms for prediction of rectal morbidity following radiotherapy, Acta Oncologica, vol.52, issue.3, pp.666-675, 2013. ,
DOI : 10.1016/j.radonc.2010.04.023
Prediction of rectum and bladder morbidity following radiotherapy of prostate cancer based on motion-inclusive dose distributions, Radiotherapy and Oncology, vol.107, issue.2, pp.147-152, 2013. ,
DOI : 10.1016/j.radonc.2013.03.029
Rectum motion and morbidity prediction: Improving correlation between late morbidity and DVH parameters through use of rectum planning organ at risk volumes, Acta Oncologica, vol.47, issue.3, pp.1061-1068, 2010. ,
DOI : 10.1080/02841860802279717
Treatment simulations with a statistical deformable motion model to evaluate margins for multiple targets in radiotherapy for high-risk prostate cancer, Radiotherapy and Oncology, vol.109, issue.3, pp.344-349, 2013. ,
DOI : 10.1016/j.radonc.2013.09.012
Bladder movement during radiation therapy for bladder cancer: Implications for treatment planning, International Journal of Radiation Oncology*Biology*Physics, vol.39, issue.2, pp.355-360, 1997. ,
DOI : 10.1016/S0360-3016(97)00070-9
Quantification of organ motion during conformal radiotherapy of the prostate by three dimensional image registration, International Journal of Radiation Oncology*Biology*Physics, vol.33, issue.5, pp.1311-1320, 1995. ,
DOI : 10.1016/0360-3016(95)00116-6
Radiation Dose???Volume Effects of the Urinary Bladder, International Journal of Radiation Oncology*Biology*Physics, vol.76, issue.3, pp.116-122, 2010. ,
DOI : 10.1016/j.ijrobp.2009.02.090
Local Polynomial Mixed-Effects Models for Longitudinal Data, Journal of the American Statistical Association, vol.97, issue.459, pp.883-897, 2002. ,
DOI : 10.1198/016214502388618672
A model to accumulate fractionated dose in a deforming organ, International Journal of Radiation Oncology*Biology*Physics, vol.44, issue.3, pp.665-675, 1999. ,
DOI : 10.1016/S0360-3016(99)00007-3
A patient-specific respiratory model of anatomical motion for radiation treatment planning, Medical Physics, vol.33, issue.12, pp.4772-4781, 2007. ,
DOI : 10.1118/1.2361077
Patient-specific vascular NURBS modeling for isogeometric analysis of blood flow, Computer Methods in Applied Mechanics and Engineering, vol.196, issue.29-30, pp.2943-2959, 2007. ,
DOI : 10.1016/j.cma.2007.02.009
Estimating anatomical trajectories with Bayesian mixed-effects modeling, NeuroImage, vol.121, pp.51-68, 2015. ,
DOI : 10.1016/j.neuroimage.2015.06.094
URL : http://doi.org/10.1016/j.neuroimage.2015.06.094
Randomized trial comparing conventional-dose with highdose conformal radiation therapy in early-stage adenocarcinoma of the prostate: long-term results from proton radiation oncology group/american college of radiology, Journal of Clinical Oncology, vol.28, issue.7, pp.95-104, 2010. ,