M. S. Andersen, D. L. Benoit, M. Damsgaard, D. K. Ramsey, and J. Rasmussen, Do kinematic models reduce the effects of soft tissue artefacts in skin marker-based motion analysis? An in vivo study of knee kinematics, J Biomech, vol.43, issue.2, pp.268-273, 2010.

M. S. Andersen, M. Damsgaard, B. Macwilliams, and J. Rasmussen, A computationally efficient optimisation-based method for parameter identification of kinematically determinate and over-determinate biomechanical systems, Comput Methods Biomech Biomed Eng, vol.13, issue.2, pp.171-183, 2010.

W. Bartels, J. Demol, F. Gelaude, I. Jonkers, V. Sloten et al., Computed tomography-based joint locations affect calculation of joint moments during gait when compared to scaling approaches, Comput Methods Biomech Biomed Eng, vol.18, issue.11, pp.1238-1251, 2015.

M. Begon, M. S. Andersen, and R. Dumas, Multibody kinematic optimization for the estimation of upper and lower limb human joint kinematics: a systematic review, J Biomech Eng, vol.140, issue.3, pp.1-11, 2017.

S. S. Blemker, D. S. Asakawa, G. E. Gold, and S. L. Delp, Imagebased musculoskeletal modeling: Applications, advances, and future opportunities, J Magn Reson Imag, vol.25, issue.2, pp.441-451, 2007.

V. Bonnet, R. Dumas, A. Cappozzo, V. Joukov, D. G. Kuli-c-d,-fraisse et al., A constrained extended Kalman filter for the optimal estimate of kinematics and kinetics of a sagittal symmetric exercise, J Biomech, vol.62, pp.140-147, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01628003

V. Camomilla, T. Bonci, and A. Cappozzo, Soft tissue displacement over pelvic anatomical landmarks during 3-D hip movements, J Biomech, vol.62, pp.14-20, 2017.

V. Camomilla, A. Cereatti, G. Vannozzi, and A. Cappozzo, An optimized protocol for hip joint centre determination using the functional method, J Biomech, vol.39, issue.6, pp.1096-1106, 2006.

Y. Chaibi, T. Cresson, A. B. Hausselle, J. Neyret, P. Hauger et al., Fast 3D reconstruction of the lower limb using a parametric model and statistical inferences and clinical measurements calculation from biplanar X-rays, Comput Methods Biomech Biomed Eng, vol.15, issue.5, pp.457-466, 2012.

J. Cl-ement, R. Dumas, N. Hagemeister, and J. A. De-guise, Soft tissue artifact compensation in knee kinematics by multi-body optimization: Performance of subject-specific knee joint models, J Biomech, vol.48, issue.14, pp.3796-3802, 2015.

M. Damsgaard, J. Rasmussen, S. T. Christensen, E. Surma, and M. De-zee, Analysis of musculoskeletal systems in the AnyBody Modeling System, Simul Model Pract Theory, vol.14, issue.8, pp.1100-1111, 2006.

U. Della-croce, A. Leardini, L. Chiari, and A. Cappozzo, Human movement analysis using stereophotogrammetry: Part 4: assessment of anatomical landmark misplacement and its effects on joint kinematics, Gait & Posture, vol.21, issue.2, pp.226-237, 2005.

S. L. Delp, F. C. Anderson, A. S. Arnold, P. Loan, A. Habib et al., OpenSim: Open-Source Software to Create and Analyze Dynamic Simulations of Movement, IEEE Trans Biomed Eng, vol.54, issue.11, pp.1940-1950, 2007.

S. L. Delp, J. P. Loan, M. G. Hoy, F. E. Zajac, E. L. Topp et al., An Interactive Graphics-Based Model of the Lower Extremity to Study Orthopaedic Surgical Procedures, IEEE Trans Biomed Eng, vol.37, issue.8, pp.757-767, 1990.

Z. Ding, C. K. Tsang, D. Nolte, A. E. Kedgley, and A. M. Bull, Improving musculoskeletal model scaling using an anatomical atlas: the importance of gender and anthropometric similarity to quantify joint reaction forces, IEEE Trans Biomed Eng, vol.66, issue.12, pp.3444-3456, 2019.

T. Dupr-e, M. Dietzsch, I. Komnik, W. Potthast, and S. David, Agreement of measured and calculated muscle activity during highly dynamic movements modelled with a spherical knee joint, J Biomech, vol.84, pp.73-80, 2018.

D. G. Eckhoff, J. M. Bach, V. M. Spitzer, K. D. Reinig, M. M. Bagur et al., Threedimensional morphology and kinematics of the distal part of the femur viewed in virtual reality: Part II, J Bone Joint Surg -Ser A, vol.85, pp.97-104, 2003.

X. Gasparutto, N. Sancisi, J. E. Parenti-castelli, V. Dumas, and R. , Validation of a multi-body optimization with knee kinematic models including ligament constraints, J Biomech, vol.48, issue.6, pp.1141-1146, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01279186

K. S. Halonen, C. M. Dzialo, M. Mannisi, M. S. Ven?-al?-ainen, D. Zee et al., Workflow assessing the effect of gait alterations on stresses in the medial tibial cartilage -Combined musculoskeletal modelling and finite element analysis, Sci Rep, vol.7, issue.1, p.17396, 2017.

S. R. Hamner and S. L. Delp, Muscle contributions to foreaft and vertical body mass center accelerations over a range of running speeds, J Biomech, vol.46, issue.4, pp.780-787, 2013.

G. G. Handsfield, C. H. Meyer, J. M. Hart, M. F. Abel, and S. S. Blemker, Relationships of 35 lower limb muscles to height and body mass quantified using MRI, J Biomech, vol.47, issue.3, pp.631-638, 2014.

M. E. Harrington, A. B. Zavatsky, S. Lawson, Z. Yuan, and T. N. Theologis, Prediction of the hip joint centre in adults, children, and patients with cerebral palsy based on magnetic resonance imaging, J Biomech, vol.40, issue.3, pp.595-602, 2007.

H. Kainz, H. X. Hoang, C. Stockton, R. R. Boyd, D. G. Lloyd et al., Accuracy and reliability of marker-based approaches to scale the pelvis, thigh, and shank segments in musculoskeletal models, J Appl Biomech, vol.33, issue.5, pp.354-360, 2017.

H. Kainz, L. Modenese, D. G. Lloyd, S. Maine, H. P. Walsh et al., Joint kinematic calculation based on clinical direct kinematic versus inverse kinematic gait models, J Biomech, vol.49, issue.9, p.10, 2016.

,

C. Klemt, D. Nolte, Z. Ding, L. Rane, R. A. Quest et al., Anthropometric Scaling of Anatomical Datasets for Subject-Specific Musculoskeletal Modelling of the Shoulder, Ann Biomed Eng, vol.47, issue.4, pp.924-936, 2019.

A. Leardini, A. Chiari, D. Croce, U. Cappozzo, and A. , Human movement analysis using stereophotogrammetry Part 3. Soft tissue artifact assessment and compensation, Gait Posture, vol.21, issue.2, pp.212-225, 2005.

T. W. Lu and J. J. O'connor, Bone position estimation from skin marker co-ordinates using global optimisation with joint constraints, J Biomech, vol.32, issue.2, pp.129-134, 1999.

M. E. Lund, M. S. Andersen, M. De-zee, and J. Rasmussen, Scaling of musculoskeletal models from static and dynamic trials, Int Biomech, vol.2, issue.1, pp.1-11, 2015.

M. E. Lund, M. Damsgaard, S. Tørholm, P. E. Galibarov, and M. Jung, The AnyBody Managed Model Repository (AMMR), 2018.

M. A. Marra, V. Vanheule, R. Fluit, B. Koopman, J. Rasmussen et al., A Subject-Specific Musculoskeletal Modeling Framework to Predict In Vivo Mechanics of Total Knee Arthroplasty, J Biomech Eng, vol.137, issue.2, p.20904, 2015.

E. Melhem, A. Assi, R. El-rachkidi, and I. Ghanem, EOSV R biplanar X-ray imaging: concept, developments, benefits, and limitations, J Child Orthop, vol.10, issue.1, pp.1-14, 2016.

A. Muller, C. Germain, C. Pontonnier, and G. Dumont, A Simple Method to Calibrate Kinematical Invariants: Application to Overhead Throwing, Int Soc Biomech Sports, pp.2-5, 2007.
URL : https://hal.archives-ouvertes.fr/hal-01150814

A. Muller, C. Pontonnier, and G. Dumont, Motion-based prediction of hands and feet contact efforts during asymmetric handling tasks, IEEE Trans Biomed Eng, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02109407

A. Muller, C. Pontonnier, C. Germain, and G. Dumont, Dealing with modularity of multibody models, Comput Methods Biomech Biomed Eng, vol.18, issue.sup1, pp.2008-2009, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01174136

A. Muller, C. Pontonnier, P. Puchaud, and G. Dumont, CusToM: a Matlab toolbox for musculoskeletal simulation, JOSS, vol.4, issue.33, pp.927-924, 2019.
URL : https://hal.archives-ouvertes.fr/hal-01988715

D. Nolte, A. Bull, and A. E. Kedgley, Bone shape reconstruction from MoCap data with soft tissue corrections using statistical shape models, European Society of Biomechanics, 2019.

A. P. Vienna, T. Pataky, R. M. Vanrenterghem, and J. , Corrigendum to Vector field statistical analysis of kinematic and force trajectories, J Biomech, vol.48, issue.1, pp.190-192, 2015.

H. Pillet, M. Sangeux, J. Hausselle, R. El-rachkidi, and W. Skalli, A reference method for the evaluation of femoral head joint center location technique based on external markers, Gait Posture, vol.39, issue.1, pp.655-658, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01083830

J. Rassmussen, M. De-zee, M. Damsgaard, S. T. Christensen, M. Clemens et al., A General Method for Scaling Musculo-Skeletal Models, International Symposium on Computer Simulation in Biomechanics, 2005.

O. H. Cleveland and U. States,

J. A. Reinbolt, R. T. Haftka, T. L. Chmielewski, and B. J. Fregly, Are patient-specific joint and inertial parameters necessary for accurate inverse dynamics analyses of gait?, IEEE Trans Biomed Eng, vol.54, issue.5, pp.782-793, 2007.

J. A. Reinbolt, J. F. Schutte, B. J. Fregly, B. I. Koh, R. T. Haftka et al., Determination of patient-specific multi-joint kinematic models through two-level optimization, J Biomech, vol.38, issue.3, pp.621-626, 2005.

V. Richard, A. Cappozzo, and R. Dumas, Comparative assessment of knee joint models used in multi-body kinematics optimisation for soft tissue artefact compensation, J Biomech, vol.62, pp.95-101, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01627863

C. Sauret, H. Pillet, W. Skalli, and M. Sangeux, On the use of knee functional calibration to determine the mediolateral axis of the femur in gait analysis: Comparison with EOS biplanar radiographs as reference, Gait Posture, vol.50, pp.180-184, 2016.

L. Scheys, I. Jonkers, D. Loeckx, F. Maes, A. Spaepen et al., Image based musculoskeletal modeling allows personalized biomechanical analysis of gait, Biomedical simulation ISBMS, vol.4072, pp.58-66, 2006.

L. Scheys, I. Jonkers, F. Schutyser, S. Pans, A. Spaepen et al., Image based methods to generate subject-specific musculoskeletal models for gait analysis, Int Cong Ser, vol.1281, pp.62-67, 2005.

I. S?-oderkvist and P. Å. Wedin, Determining the movements of the skeleton using well-configured markers, J Biomech, vol.26, issue.12, pp.1473-1477, 1993.

U. Trinler and R. Baker, Estimated landmark calibration of biomechanical models for inverse kinematics, Med Eng Phys, vol.51, pp.79-83, 2018.

G. Valente, L. Pitto, D. Testi, A. Seth, S. L. Delp et al., Are subject-specific musculoskeletal models robust to the uncertainties in parameter identification, Smith GD, Nigg BM, vol.9, pp.1477-1488, 1994.

G. Wu, S. Siegler, P. Allard, C. Kirtley, A. Leardini et al., ISB recommendation on definitions of joint coordinate system of various joints for the reporting of human joint motionâpart I: ankle, hip, and spine, J Biomech, vol.35, issue.4, pp.543-548, 2002.

J. Zhang, J. Fernandez, J. Hislop-jambrich, and T. F. Besier, Lower limb estimation from sparse landmarks using an articulated shape model, J Biomech, vol.49, issue.16, pp.3875-3881, 2016.